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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843988.1_cds_XP_016508889.1_21865
CDS Infomation

[gene=LOC107826425] [db_xref=GeneID:107826425] [protein=uncharacterized protein LOC107826425 isoform X2] [protein_id=XP_016508889.1] [location=join(158623..158954,160540..160727,161101..161205,161288..161359,161597..161744,162139..162221,164929..164984,167110..167246,167457..167547,167650..167715,167838..168060,168173..168274,168813..168898,168980..169102,169578..169622)] [gbkey=CDS]
Sequence

ATGGCACTTTCAGCCATCGCCACTGTGACTCGTCACTATGGTCGCTGCTCACCATACTCA
TTTTCTTCTTCTCCTTTGATTCACATTACGCGTACCAGAAAACTAGTCACTAGAAGAGTA
TCTCTTCCTACCAGAATGTCTTCCTTTAAACCCATCTCACCGCCACCGCAAAACCATCCT
TCGACTGAGAACAATCTCACGGCACCCTATGGCTCTTGGAAGTCACCCATCACTGCTGAC
ATCGTCTCTGGCTCCAGCAAACGCCTCGGTGGCTTTGCAGTCGATTCAGTTGGTCATCTT
TTCTGGCTAGAATCACGCCCTACAGAGTCCGGACGAGCGGTTATTGTGAAGGAACCAGGG
AAACCAGGGGAAGACCCCGTAGATGTAACACCTACGGATTTTGCTGTGAGGACGTTGGCT
CAGGAGTATGGTGGTGGTGATTTTTATATATCAGGAGACTCTTTAATCTTCTCTAATTAC
AAAGATCAGAGACTTTATATACAGTCCATTTCGTCCACAGATTCTGCTCCATTGCCACTC
ACTCCAGATTATGGTGGACAAAGTGTATGCTATGCTGATGGAGTGTTTGACTCTCGATTT
AACCGTTATGTCACAGTGAGAGAAGATCAACATGAAAGTGGTATTAATGCGATTACCACA
ATTGTATCTGTCAATCTGAGCAATAACAGCGCTCAAGAACCAAGGCTATTAGTTGGGGGC
AATGACTTCTATGCTTCTCCTCGAATCGATCCCAAAGGGGAACGTATGGCATGGATTGAA
TGGGGTCACCCAAATATGCCATGGGACAGATCAGAGCTTTGGGTTGGCTATATATCAGAC
AATGGGGATGTGCAGAAACGTATTTGTGTTGCTGGCGGTGATCCTATTCTTGTGGAGTCT
CCAACTGAACCCCGATGGTCTTCTCAAGGAGAACTATTCTTTGTAACCGACAGGAAAAGT
GGGTTTTGGAATATCTACAAATGGGTAGAATCTTCTAACGAGGTGTTACCAGTTTACTCC
CTCAATGCTGAGTTTACAAGACCCTTATGGATATTTGGGATGAAGTCTTATGACTTTCTT
GAGCACCACAGCCAAAATACTTTAATTGCCTGCAGTTACAGGGAGAATGGGAAGTCATAT
CTCGGAGTTCTGGATGTTACCCAGGGCAAAATATCAGTGCTTGACATTCCTTTCACAGAT
ATAAACAACATCAGTTCTGGGGTTCATAGCTTGTATGTTGAAGGATCATCTGCTGTTCAT
CCATCGTCATTAGCTAAGATTACTTTGGATGATCAGAGAACAAAAGCAATTGATTTCAAG
ATTATGTGGTCGTCATCATCTATTAGTGAGATGTATACGTCGTACTACAGTTGGCCTGAG
TTGATGAAGTTCCCAACAGACATCCCGGGTCAAAGTGCATATGCATACTTTTATCCACCA
ACAAACCCCAACTATCAAGCCAGTCATGGAGAAAAACCTCCATTGCTCATGCGAAGTCAT
GGAGGTCCTACAGCTGAAGCACGGGGATGTTTAAATCTTAGTGTTCAATATTGGACCAGT
CGTGGTTGGGCATATGTGGATGTGGATTATGGTGGAAGCACTGGTTATGGCAGAGAATAT
CGAGAAAGACTGTTGGGAAAATGGGGAATTGTGGATGTCAACGACTGTTGCAATTGTGCC
ATGTTTTTGGTTGACAGTGGAAGGGTTGACGGTGAAAGACTTTGTATTACGGGGAGTTCC
GCTGGTGGTTATACAACATTAGCTGCACTAGCATTTAAAGATGTTTTCAAGGCTGGAGCT
TCCTTGTATGGTGGGATGAGAAGGCATATTTTGAGAGGTCGCCAATCAATTTCGTAA

Peptide Sequence

PEP ID

XP_016508889.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107826425 isoform X2 [Nicotiana tabacum]
Sequence

MALSAIATVTRHYGRCSPYSFSSSPLIHITRTRKLVTRRVSLPTRMSSFKPISPPPQNHP
STENNLTAPYGSWKSPITADIVSGSSKRLGGFAVDSVGHLFWLESRPTESGRAVIVKEPG
KPGEDPVDVTPTDFAVRTLAQEYGGGDFYISGDSLIFSNYKDQRLYIQSISSTDSAPLPL
TPDYGGQSVCYADGVFDSRFNRYVTVREDQHESGINAITTIVSVNLSNNSAQEPRLLVGG
NDFYASPRIDPKGERMAWIEWGHPNMPWDRSELWVGYISDNGDVQKRICVAGGDPILVES
PTEPRWSSQGELFFVTDRKSGFWNIYKWVESSNEVLPVYSLNAEFTRPLWIFGMKSYDFL
EHHSQNTLIACSYRENGKSYLGVLDVTQGKISVLDIPFTDINNISSGVHSLYVEGSSAVH
PSSLAKITLDDQRTKAIDFKIMWSSSSISEMYTSYYSWPELMKFPTDIPGQSAYAYFYPP
TNPNYQASHGEKPPLLMRSHGGPTAEARGCLNLSVQYWTSRGWAYVDVDYGGSTGYGREY
RERLLGKWGIVDVNDCCNCAMFLVDSGRVDGERLCITGSSAGGYTTLAALAFKDVFKAGA
SLYGGMRRHILRGRQSIS

Transcript Sequence

Gene sequence data has not been registered.